@00:26:36.07PDT26-Jul-19
>BREAK< ESP3 Gateway v0.99 for core bus @00:26:36.09 >BREAK< ESP3 Gateway v0.99 for cartridge bus @00:26:37.65 Configuration for honu by brent@mbari.org 4/4/19 /home/esp/esp2/type/auv/honu/configure.rb @00:26:40.07 Polling Can every 5:00 @00:26:40.37 Clients may connect on TCP port 9999 Connecting to 10.89.5.2:9999 @00:26:40.42 Waiting for espclients... @00:26:40.87 Session Begun @00:26:42.83 -> showStatus @00:26:44.85 -> Cmd.loadCartridge -9 @00:26:45.20 Gate.power :main,:ON,limit to 5000mA @00:26:45.22 Gate.power :analytic1,:ON,limit to 5000mA @00:26:45.24 Gate.power :analytic2,:ON,limit to 5000mA @00:26:45.27 Gate.power :analytic3,:ON,limit to 5000mA @00:26:45.39 Powering core bus @00:26:47.68 SPR Module 1, FW Rev. B, FPGA Rev. C @00:26:47.81 Archive.configure :default @00:26:47.94 Air.configure :default @00:26:48.05 Lysis1.configure :default @00:26:48.15 Lysis2.configure :default @00:26:48.26 Plunge.configure :default @00:26:48.38 SamplePump.configure :default @00:26:48.50 ExtraPump.configure :default @00:26:48.62 Toroid.configure :default @00:26:48.74 Carousel.configure :default @00:26:48.86 Pressure.configure :default @00:26:48.97 PinPort.configure :default @00:26:49.04 All elf controllers running firmware version 4.58 @00:26:49.06 Gate.power :motor,:ON,limit to 5000mA @00:26:49.18 Archive.reconfigure :default @00:26:49.50 Archive.home.jog 0 @00:26:49.66 PinPort.reconfigure :default @00:26:49.70 Toroid.reconfigure :default @00:26:49.77 Lysis2.reconfigure :default @00:26:49.81 Lysis1.reconfigure :default @00:26:49.85 Plunge.reconfigure :default @00:26:49.96 Air.reconfigure :default @00:26:50.14 Plunge.home.jog 0 @00:26:50.20 Lysis2.home.jog 0 @00:26:50.26 Toroid.home.jog 0 @00:26:50.31 Lysis1.home.jog 0 @00:26:50.37 PinPort.home.jog 0 @00:26:50.42 Air.home.jog 0 @00:26:50.67 Archive.reconfigure :homing @00:26:50.91 Toroid.reconfigure :homing @00:26:50.93 Plunge.reconfigure :homing @00:26:50.98 PinPort.reconfigure :homing @00:26:51.03 Lysis2.reconfigure :homing @00:26:51.06 Lysis1.reconfigure :homing @00:26:51.24 Lysis1.jog 1414 @00:26:51.30 Toroid.jog 617 @00:26:51.35 Archive.jog 1399 @00:26:51.41 Lysis2.jog 155 @00:26:51.46 PinPort.jog -106 @00:26:51.52 Plunge.jog 1559 @00:26:51.60 Air.reconfigure :homing @00:26:51.67 Air.jog 151 @00:26:51.74 PinPort.setRawPosition! 0 @00:26:51.79 PinPort.seek :home @00:26:51.89 Lysis2.setRawPosition! 50 @00:26:51.91 PinPort.reconfigure :default @00:26:51.98 Lysis2.seek :home @00:26:52.10 Air.setRawPosition! 50 @00:26:52.15 Air.seek :home @00:26:52.28 Lysis2.reconfigure :default @00:26:52.40 Lysis1.setRawPosition! 50 @00:26:52.45 Lysis1.seek :home @00:26:52.55 Air.reconfigure :default @00:26:52.58 Archive.setRawPosition! 50 @00:26:52.66 Archive.seek :home @00:26:52.77 Plunge.setRawPosition! 50 @00:26:52.79 Lysis1.reconfigure :default @00:26:52.85 Plunge.seek :home @00:26:52.98 Archive.reconfigure :default @00:26:53.18 Plunge.reconfigure :default @00:26:53.39 Toroid.setRawPosition! 0 @00:26:53.43 Toroid.seek :home @00:26:53.52 Toroid.reconfigure :default @00:26:53.64 Toroid.seek :clear @00:26:55.26 Carousel.reconfigure :default @00:26:55.33 Carousel.home.jog 0 @00:26:55.83 Carousel.seek 20 @00:26:55.98 Selecting Cartridge 19 @00:26:56.22 Carousel.seek 19 @00:26:56.70 Lysis1.seek :locked @00:27:00.83 Plunge.seek :locked @00:27:00.95 Air.seek :locked @00:27:05.08 Powering cartridge bus @00:27:07.20 Gate.setIR 1750,5000,0,6 @00:27:07.33 Gate.setIR 0,5000,0,6 @00:27:07.38 Loaded Lyse-n-Go Cartridge @00:27:07.40 PuckHeater.configure HeatConfig @00:27:07.44 Gate.power :heat,:ON,limit to 5000mA @00:27:23.58 -> Cmd.startFiltering @00:27:23.81 Duration of filtering limited to 2:05:00 @00:27:24.07 Priming sample loop w/100ml, bypass w/10ml @00:27:24.09 SamplePump.setPosition! 0ml @00:27:24.13 Bypass.open @00:27:25.61 Intake.open @00:27:26.39 Sea 4.2m deep (20.9psia) @00:27:26.41 Waiting up to 20 seconds for sea pressure to stabilize +/-0.50psi @00:27:29.26 Vacuum tare is 52% of full scale @00:27:29.39 Pressure.reconfigure :default @00:27:29.45 Pressure.hold @00:27:29.61 SamplePump.reconfigure :prime @00:27:29.68 SamplePump.seek 10ml,1:10 @00:27:38.64 Pressure.coast @00:27:38.69 SamplePump.setPosition! 0ml @00:27:39.11 Exhaust.open @00:27:40.53 Bypass.close @00:27:42.04 Pressure.reconfigure :default @00:27:42.10 Pressure.hold @00:27:42.21 Sea 4.1m deep (20.7psia) @00:27:42.34 SamplePump.reconfigure :prime @00:27:42.42 SamplePump.seek 100ml,7:10 @00:29:38.25 Pressure.coast @00:29:38.31 Bypass.open @00:29:39.02 Intake.close @00:29:39.84 Toroid.reconfigure :hold @00:29:39.90 Toroid.seek :crack @00:29:40.70 Toroid.reconfigure :default @00:29:40.76 Toroid.seek :clear @00:29:42.32 Toroid.reconfigure :hold @00:29:42.39 Toroid.seek :cartridge @00:29:44.20 Toroid.reconfigure :default @00:29:44.26 Toroid.seek :clear @00:29:46.23 Pressurizing cartridge to 14psi above 20.4psia @00:29:46.24 SamplePump.setPosition! 0ml @00:29:46.29 Intake.open @00:29:47.01 Bypass.close @00:29:47.75 Exhaust.close @00:29:48.53 Pressure.reconfigure :default @00:29:48.60 Pressure.hold @00:29:48.76 SamplePump.reconfigure :charge @00:29:48.83 SamplePump.seek 2.3ml,41 seconds @00:29:57.09 Pressure.coast @00:29:57.14 Intake.close @00:29:57.97 Pressurized cartridge with 0.318ml to 14.0psi @00:29:57.98 Isolated @32.8psia (12.3psi) @00:29:57.99 Checking for cartridge leaks from 32.8psia @00:29:58.02 Waiting up to 20 seconds for cartridge pressure to stabilize +/-0.75psi @00:30:03.12 Sampling 1000.0ml @00:30:03.14 SamplePump.setPosition! 0ml @00:30:03.19 Exhaust.open @00:30:03.88 Intake.open @00:30:04.76 Pressure.reconfigure :default @00:30:04.81 Pressure.hold @00:30:04.92 Sea 4.3m deep (21.1psia) @00:30:05.06 SamplePump.reconfigure :sample @00:30:05.14 SamplePump.seek 1000ml,1:07:09 @00:30:07.79 Cartridge 19 sampling 1/1000ml at 0.36ml/s with 13.5psi vacuum 2.8m deep (18.8psia) @00:31:07.80 Cartridge 19 sampling 21/1000ml at 0.35ml/s with 12.1psi vacuum 4.3m deep (21.1psia) @00:32:07.80 Cartridge 19 sampling 43/1000ml at 0.33ml/s with 13.1psi vacuum 2.4m deep (18.2psia) @00:33:07.80 Cartridge 19 sampling 63/1000ml at 0.34ml/s with 13.1psi vacuum 3.0m deep (19.2psia) @00:34:07.80 Cartridge 19 sampling 84/1000ml at 0.33ml/s with 14.5psi vacuum 2.7m deep (18.7psia) @00:35:07.80 Cartridge 19 sampling 104/1000ml at 0.32ml/s with 13.0psi vacuum 2.6m deep (18.5psia) @00:36:07.80 Cartridge 19 sampling 124/1000ml at 0.32ml/s with 12.3psi vacuum 3.1m deep (19.3psia) @00:37:07.80 Cartridge 19 sampling 144/1000ml at 0.33ml/s with 13.2psi vacuum 3.1m deep (19.3psia) @00:38:07.80 Cartridge 19 sampling 163/1000ml at 0.32ml/s with 15.0psi vacuum 2.6m deep (18.5psia) @00:39:07.80 Cartridge 19 sampling 182/1000ml at 0.32ml/s with 12.7psi vacuum 2.9m deep (19.0psia) @00:40:07.80 Cartridge 19 sampling 202/1000ml at 0.31ml/s with 12.1psi vacuum 2.8m deep (18.9psia) @00:41:07.80 Cartridge 19 sampling 221/1000ml at 0.30ml/s with 11.8psi vacuum 3.2m deep (19.5psia) @00:42:07.80 Cartridge 19 sampling 240/1000ml at 0.30ml/s with 12.3psi vacuum 3.6m deep (20.0psia) @00:43:07.80 Cartridge 19 sampling 258/1000ml at 0.30ml/s with 13.4psi vacuum 2.1m deep (17.8psia) @00:44:07.80 Cartridge 19 sampling 277/1000ml at 0.32ml/s with 12.5psi vacuum 3.9m deep (20.5psia) @00:45:07.80 Cartridge 19 sampling 295/1000ml at 0.31ml/s with 12.5psi vacuum 4.1m deep (20.7psia) @00:46:07.80 Cartridge 19 sampling 313/1000ml at 0.29ml/s with 12.4psi vacuum 3.0m deep (19.2psia) @00:47:07.80 Cartridge 19 sampling 330/1000ml at 0.28ml/s with 14.1psi vacuum 2.8m deep (18.8psia) @00:48:07.80 Cartridge 19 sampling 348/1000ml at 0.29ml/s with 10.7psi vacuum 3.6m deep (20.1psia) @00:49:07.80 Cartridge 19 sampling 365/1000ml at 0.28ml/s with 12.6psi vacuum 2.6m deep (18.6psia) @00:50:07.80 Cartridge 19 sampling 382/1000ml at 0.27ml/s with 12.6psi vacuum 2.9m deep (19.0psia) @00:51:07.80 Cartridge 19 sampling 399/1000ml at 0.27ml/s with 13.6psi vacuum 2.3m deep (18.1psia) @00:52:07.80 Cartridge 19 sampling 416/1000ml at 0.27ml/s with 12.8psi vacuum 2.4m deep (18.2psia) @00:53:07.80 Cartridge 19 sampling 432/1000ml at 0.26ml/s with 12.6psi vacuum 2.7m deep (18.7psia) @00:54:07.80 Cartridge 19 sampling 449/1000ml at 0.28ml/s with 15.0psi vacuum 2.8m deep (18.9psia) @00:55:07.80 Cartridge 19 sampling 465/1000ml at 0.26ml/s with 14.8psi vacuum 2.5m deep (18.4psia) @00:56:07.80 Cartridge 19 sampling 481/1000ml at 0.25ml/s with 14.6psi vacuum 2.5m deep (18.4psia) @00:57:07.80 Cartridge 19 sampling 497/1000ml at 0.25ml/s with 13.5psi vacuum 2.0m deep (17.6psia) @00:58:07.80 Cartridge 19 sampling 513/1000ml at 0.25ml/s with 14.1psi vacuum 2.5m deep (18.4psia) @00:59:07.80 Cartridge 19 sampling 528/1000ml at 0.25ml/s with 12.8psi vacuum 3.3m deep (19.6psia) @01:00:07.80 Cartridge 19 sampling 544/1000ml at 0.25ml/s with 14.9psi vacuum 2.3m deep (18.1psia) @01:01:07.80 Cartridge 19 sampling 559/1000ml at 0.25ml/s with 13.5psi vacuum 3.1m deep (19.3psia) @01:02:07.80 Cartridge 19 sampling 575/1000ml at 0.26ml/s with 13.8psi vacuum 2.8m deep (18.9psia) @01:03:07.80 Cartridge 19 sampling 590/1000ml at 0.25ml/s with 14.5psi vacuum 3.1m deep (19.3psia) @01:04:07.80 Cartridge 19 sampling 605/1000ml at 0.25ml/s with 13.6psi vacuum 2.7m deep (18.7psia) @01:05:08.18 Cartridge 19 sampling 620/1000ml at 0.25ml/s with 14.7psi vacuum 2.6m deep (18.5psia) @01:05:21.28 Flow averaged 0.30ml/s over 35:14 @01:05:21.31 Waiting up to 7 seconds for vacuum to reduce from 14.7 to 10.0psi @01:05:22.01 Relieved excess vacuum in 3.7 seconds @01:05:22.03 SamplePump.seek 1000ml,25:36 @01:06:07.79 Cartridge 19 sampling 635/1000ml at 0.25ml/s with 13.3psi vacuum 2.9m deep (19.0psia) @01:07:00.80 Flow averaged 0.26ml/s over 1:37 @01:07:00.83 Waiting up to 7 seconds for vacuum to reduce from 14.6 to 10.0psi @01:07:01.54 Relieved excess vacuum in 3.1 seconds @01:07:01.56 SamplePump.seek 1000ml,23:57 @01:07:04.40 Flow estimate reduced to 0.21ml/s @01:07:04.41 Intake.close @01:07:04.48 Exhaust.close @01:07:04.64 Toroid.reconfigure :hold @01:07:04.72 Toroid.seek :bypass @01:07:06.35 Toroid.reconfigure :default @01:07:06.43 Toroid.seek :clear @01:07:07.79 Cartridge 19 sampling 649/1000ml at 0.00ml/s with 1.3psi vacuum 5.1m deep (22.2psia) @01:07:08.04 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @01:07:08.06 Pressure.coast @01:07:08.24 Sampled 649.0ml @01:07:10.33 -> Cmd.startProcessing @01:07:12.18 SPR.command "read_sequences" @01:07:12.68 SPR.command "stats_on" @01:07:12.72 SPR.command "start 0 1" @01:07:14.72 Begun log /var/log/esp/spr19jul2601h.spr @01:07:15.53 Handoff.select :waste @01:07:15.71 Archive.seek :empty @01:07:22.88 Syringe tare is 21% of full scale @01:07:33.44 PinPort.seek :cartridge @01:07:38.00 Lysis1.seek 1350ul @01:07:40.47 Lysis2.seek 1700ul @01:07:43.56 Plunge.seek :reagent @01:07:44.40 Evacuating puck with filter bubble point of 30psi @01:07:44.42 PinPort.seek :cartridge @01:07:44.51 Handoff.select :waste @01:07:51.81 Air pumping 1 strokes to reach 4psi @01:07:51.83 Air.reconfigure :gulp @01:07:51.91 Air.seek :tVent @01:07:53.72 -0.0psi after gulp @01:07:53.73 Air stroke #1 of 1 @01:07:53.75 Air.reconfigure :pressurize @01:07:53.84 Air.seek :pressurized @01:08:06.67 0.1psi after pressurize @01:08:06.68 Air.reconfigure :compress @01:08:06.76 Air.seek :evac @01:08:09.42 0.3psi after compress @01:08:13.77 Handoff.select :blocked @01:08:13.89 SPR.command "start 2 14" @01:08:14.29 Slide::Error in PROCESSING -- Air Syringe (AirS) pressureOutOfBounds at evac (sensed 168ul) (try 1 of 3) @01:08:17.01 Handoff.select :waste @01:08:17.48 Ended log /var/log/esp/spr19jul2601h.spr @01:08:17.49 SPR.command "stats_off" @01:08:17.96 Slide::Error in PROCESSING -- Archive Syringe (ArS) positionErr at empty (sensed 23ul) @01:08:17.99 Thread::ChildDied in LRAUV -- :PROCESSING @01:08:18.84 -> Cmd.stop @01:08:18.92 Handoff.select :close @01:08:19.05 Gate.power :heat,:OFF @01:08:19.07 Gate.power :cartridge,:OFF @01:08:19.15 Carousel.seek 19 @01:08:19.32 Plunge.seek :locked @01:08:20.16 PinPort.seek :clear @01:08:24.83 Slide::Error in LRAUV -- Archive Syringe (ArS) Not yet Homed! @01:08:24.87 Archive.coast @01:08:24.95 Air.coast @01:08:25.05 Lysis1.coast @01:08:25.15 Lysis2.coast @01:08:25.25 Plunge.coast @01:08:25.30 SamplePump.coast @01:08:25.35 Toroid.coast @01:08:25.40 Carousel.coast @01:08:25.44 PinPort.coast @01:08:25.62 Gate.power :motor,:OFF @01:08:25.64 Gate.power :core,:OFF @01:08:25.66 Gate.power :analytic1,:OFF @01:08:25.70 Gate.power :analytic2,:OFF @01:08:25.72 Gate.power :analytic3,:OFF @01:08:25.74 Gate.power :main,:OFF @01:08:25.76 ready to power off