@15:44:04.52EDT04-Sep-18
>BREAK< ESP3 Gateway v0.99 for core bus @15:44:04.54 >BREAK< ESP3 Gateway v0.99 for cartridge bus @15:44:05.79 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @15:44:07.17 Polling Can every 5:00 @15:44:07.47 Clients may connect on TCP port 9999 @15:44:07.48 Connecting to 10.89.5.2:9999 @15:44:07.51 Waiting for espclients... @15:44:07.83 Session Begun @15:44:09.78 -> showStatus @15:44:11.76 -> Cmd.loadCartridge @15:44:11.88 Gate.power :main,:ON,limit to 5000mA @15:44:11.90 Gate.power :analytic1,:ON,limit to 5000mA @15:44:11.92 Gate.power :analytic2,:ON,limit to 5000mA @15:44:11.94 Gate.power :analytic3,:ON,limit to 5000mA @15:44:12.08 Powering core bus @15:44:14.41 SPR Module 1, FW Rev. B, FPGA Rev. C @15:44:14.51 ArS.configure ArSconfig @15:44:14.61 LyS1.configure LyS1config @15:44:14.72 LyS2.configure LyS2config @15:44:14.83 AirS.configure AirSconfig @15:44:14.95 TV.configure TVconfig @15:44:15.07 SP.configure SPconfig @15:44:15.18 SC.configure SCconfig @15:44:15.30 PV.configure PVconfig @15:44:15.42 PinPort.configure PPconfig @15:44:15.54 Sea.configure SPconfig @15:44:15.60 All elf controllers running firmware version 4.5 @15:44:15.62 Gate.power :motor,:ON,limit to 5000mA @15:44:15.74 ArS.reconfigure ArSconfig @15:44:15.98 ArS.home.jog 0 @15:44:16.19 PV.reconfigure PVconfig @15:44:16.26 TV.reconfigure TVconfig @15:44:16.28 LyS2.reconfigure LyS2config @15:44:16.32 PinPort.reconfigure PPconfig @15:44:16.36 LyS1.reconfigure LyS1config @15:44:16.42 AirS.reconfigure AirSconfig @15:44:16.62 PV.home.jog 0 @15:44:16.65 TV.home.jog 0 @15:44:16.67 PinPort.home.jog 0 @15:44:16.69 LyS2.home.jog 0 @15:44:16.73 LyS1.home.jog 0 @15:44:16.76 AirS.home.jog 0 @15:44:17.16 ArS.reconfigure HomeMagSyringe @15:44:17.33 PV.reconfigure HomePV @15:44:17.46 PinPort.reconfigure HomePP @15:44:17.51 TV.reconfigure HomeTV @15:44:17.54 ArS.jog -227 @15:44:17.58 LyS2.reconfigure HomeSyringe @15:44:17.69 PV.jog -1458 @15:44:17.74 PinPort.jog -110 @15:44:17.79 TV.jog -542 @15:44:17.91 LyS2.jog -259 @15:44:18.04 LyS1.reconfigure HomeSyringe @15:44:18.06 AirS.reconfigure HomeMagSyringe @15:44:18.16 AirS.jog -317 @15:44:18.20 LyS1.jog -270 @15:44:18.57 PinPort.setRawPosition! 0 @15:44:18.59 LyS2.setRawPosition! -50 @15:44:18.61 ArS.setRawPosition! -50 @15:44:18.70 PinPort.seek :home @15:44:18.77 ArS.seek :home @15:44:18.82 LyS2.seek :home @15:44:19.01 AirS.setRawPosition! -50 @15:44:19.03 PinPort.reconfigure PPconfig @15:44:19.05 LyS1.setRawPosition! -50 @15:44:19.18 AirS.seek :home @15:44:19.22 LyS1.seek :home @15:44:19.37 PV.setRawPosition! -50 @15:44:19.39 LyS2.reconfigure LyS2config @15:44:19.41 ArS.reconfigure ArSconfig @15:44:19.54 PV.seek :home @15:44:19.68 LyS1.reconfigure LyS1config @15:44:19.70 AirS.reconfigure AirSconfig @15:44:19.87 TV.setRawPosition! 0 @15:44:19.92 TV.seek :home @15:44:20.02 TV.reconfigure TVconfig @15:44:20.04 PV.reconfigure PVconfig @15:44:20.29 TV.seek :clear @15:44:21.90 TV.coast @15:44:21.96 SC.reconfigure HomeSC @15:44:22.02 SC.home.jog 0 @15:44:22.78 SC.reconfigure SCconfig @15:44:22.84 SC.seek 2 @15:44:22.92 Selecting Cartridge 1 @15:44:23.23 SC.seek 1 @15:44:23.73 LyS2.seek :locked @15:44:23.86 PV.seek :locked @15:44:23.99 AirS.seek :locked @15:44:28.07 Powering cartridge bus @15:44:30.20 Gate.setIR 1750,5000,0,6 @15:44:30.32 Gate.setIR 0,5000,0,6 @15:44:30.37 Loaded Lyse-n-Go Cartridge @15:44:30.38 PuckHeater.configure HeatConfig @15:44:30.44 Gate.power :heat,:ON,limit to 5000mA @15:44:53.03 -> Cmd.startFiltering @15:44:53.26 Duration of filtering limited to 1:05:00 @15:44:53.52 Priming sample loop w/100ml, bypass w/10ml @15:44:53.60 SP.setPosition! 0ml @15:44:53.64 Intake.open @15:44:53.67 Exhaust.open @15:44:54.51 Sea @-42.9psia @15:44:54.53 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @15:45:00.31 Vacuum tare is 25% of full scale @15:45:00.33 PB.open @15:45:00.37 Exhaust.close @15:45:01.19 Sea @-42.9psia @15:45:01.27 SP.reconfigure SPprime @15:45:01.34 SP.seek 10ml,1:21 @15:45:12.19 SP.setPosition! 0ml @15:45:12.23 PB.close @15:45:12.26 Exhaust.open @15:45:13.10 Sea @-42.9psia @15:45:13.18 SP.reconfigure SPprime @15:45:13.25 SP.seek 100ml,8:51 @15:47:09.71 Intake.close @15:47:10.46 Pressurizing cartridge to 26psi (try #1 of 3) @15:47:10.47 SP.setPosition! 0ml @15:47:10.52 PB.open @15:47:11.34 TV.seek :crack @15:47:12.13 TV.seek :clear @15:47:12.92 Intake.open @15:47:14.40 PB.close @15:47:15.11 Exhaust.close @15:47:15.90 Sea @-42.9psia @15:47:15.98 SP.reconfigure SPcharge @15:47:16.04 SP.seek 2.3ml,42 seconds @15:47:27.39 Cartridge pressurized with 0.602ml to 27.2psi @15:47:27.76 delay 3 seconds @15:47:30.83 Cartridge at 23.4psi 3 seconds later @15:47:30.91 TV.seek :cartridge @15:47:32.74 TV.seek :clear @15:47:34.55 Sampling 1000.0ml @15:47:34.56 SP.setPosition! 0ml @15:47:34.61 Exhaust.open @15:47:35.44 Sea @-42.9psia @15:47:35.53 SP.reconfigure SPsample @15:47:35.59 SP.seek 1000ml,1:23:53 @15:47:36.55 Cartridge 1 sampling 0/1000ml at 0.17ml/s with 3.8psi vacuum @15:48:36.56 Cartridge 1 sampling 32/1000ml at 0.54ml/s with 23.4psi vacuum @15:49:36.56 Cartridge 1 sampling 64/1000ml at 0.53ml/s with 24.1psi vacuum @15:50:36.56 Cartridge 1 sampling 96/1000ml at 0.53ml/s with 22.7psi vacuum @15:51:36.56 Cartridge 1 sampling 128/1000ml at 0.54ml/s with 22.7psi vacuum @15:52:36.56 Cartridge 1 sampling 160/1000ml at 0.54ml/s with 23.1psi vacuum @15:53:36.56 Cartridge 1 sampling 193/1000ml at 0.54ml/s with 23.1psi vacuum @15:54:36.55 Cartridge 1 sampling 225/1000ml at 0.54ml/s with 23.7psi vacuum @15:55:36.56 Cartridge 1 sampling 257/1000ml at 0.53ml/s with 22.3psi vacuum @15:56:36.56 Cartridge 1 sampling 290/1000ml at 0.54ml/s with 22.3psi vacuum @15:57:36.56 Cartridge 1 sampling 322/1000ml at 0.54ml/s with 23.8psi vacuum @15:58:36.56 Cartridge 1 sampling 355/1000ml at 0.54ml/s with 22.5psi vacuum @15:59:36.55 Cartridge 1 sampling 387/1000ml at 0.54ml/s with 22.3psi vacuum @16:00:36.56 Cartridge 1 sampling 419/1000ml at 0.54ml/s with 24.2psi vacuum @16:01:36.59 Cartridge 1 sampling 452/1000ml at 0.54ml/s with 24.2psi vacuum @16:02:36.56 Cartridge 1 sampling 484/1000ml at 0.55ml/s with 22.9psi vacuum @16:03:36.56 Cartridge 1 sampling 517/1000ml at 0.55ml/s with 22.8psi vacuum @16:04:36.55 Cartridge 1 sampling 550/1000ml at 0.55ml/s with 23.0psi vacuum @16:05:36.56 Cartridge 1 sampling 582/1000ml at 0.55ml/s with 21.8psi vacuum @16:06:36.56 Cartridge 1 sampling 615/1000ml at 0.55ml/s with 22.2psi vacuum @16:07:36.56 Cartridge 1 sampling 647/1000ml at 0.55ml/s with 22.9psi vacuum @16:08:36.56 Cartridge 1 sampling 680/1000ml at 0.54ml/s with 22.5psi vacuum @16:09:36.56 Cartridge 1 sampling 712/1000ml at 0.54ml/s with 23.0psi vacuum @16:10:36.56 Cartridge 1 sampling 745/1000ml at 0.53ml/s with 24.2psi vacuum @16:11:36.56 Cartridge 1 sampling 777/1000ml at 0.54ml/s with 23.7psi vacuum @16:12:36.56 Cartridge 1 sampling 810/1000ml at 0.55ml/s with 22.9psi vacuum @16:13:36.56 Cartridge 1 sampling 842/1000ml at 0.55ml/s with 22.9psi vacuum @16:14:36.56 Cartridge 1 sampling 875/1000ml at 0.54ml/s with 22.6psi vacuum @16:15:36.56 Cartridge 1 sampling 907/1000ml at 0.53ml/s with 23.0psi vacuum @16:16:36.56 Cartridge 1 sampling 940/1000ml at 0.54ml/s with 23.8psi vacuum @16:17:36.56 Cartridge 1 sampling 972/1000ml at 0.55ml/s with 23.2psi vacuum @16:18:28.15 Intake.close @16:18:28.18 Exhaust.close @16:18:28.98 Sampled 1000.0ml @16:18:29.06 TV.seek :bypass @16:18:30.68 TV.seek :clear @16:18:32.92 -> Cmd.startProcessing @16:18:34.74 SPR.command "read_sequences" @16:18:35.26 SPR.command "stats_on" @16:18:35.30 SPR.command "start 0 1" @16:18:37.31 Begun log /var/log/esp/spr18sep0416h.spr @16:18:38.12 Handoff.select :waste @16:18:38.25 ArS.seek empty @16:18:55.96 PinPort.seek :cartridge @16:19:01.67 LyS1.seek 1350ul @16:19:07.61 PV.seek :reagent @16:19:08.44 AirS.seek :tVent @16:19:10.51 delay 2 seconds @16:19:12.53 AirS.reconfigure EvacAirS @16:19:12.59 AirS.seek :evac @16:19:34.89 delay 15 seconds @16:19:49.91 AirS.reconfigure AirSconfig @16:19:49.97 AirS.seek :tVent @16:20:04.19 delay 2 seconds @16:20:06.21 AirS.reconfigure EvacAirS @16:20:06.27 AirS.seek :evac @16:20:28.55 delay 15 seconds @16:20:43.57 AirS.reconfigure AirSconfig @16:20:43.63 AirS.seek :tVent @16:20:57.84 delay 2 seconds @16:20:59.86 AirS.reconfigure EvacAirS @16:20:59.92 AirS.seek :evac @16:21:22.21 delay 15 seconds @16:21:37.24 AirS.reconfigure AirSconfig @16:21:37.30 AirS.seek :tVent @16:21:51.52 delay 2 seconds @16:21:53.56 AirS.reconfigure EvacAirS @16:21:53.62 AirS.seek :evac @16:22:15.90 delay 15 seconds @16:22:30.92 AirS.reconfigure AirSconfig @16:22:30.98 AirS.seek :tVent @16:22:45.18 delay 2 seconds @16:22:47.21 AirS.reconfigure EvacAirS @16:22:47.27 AirS.seek :evac @16:23:09.55 delay 15 seconds @16:23:24.58 delay 1:30 @16:24:54.60 AirS.reconfigure AirSconfig @16:24:54.66 AirS.seek :fVent @16:24:56.10 delay 15 seconds @16:25:11.12 LyS1.reconfigure SlowLyS1 @16:25:11.22 LyS1.seek 1050ul @16:25:41.21 delay 5 seconds @16:25:46.24 Handoff.select :blocked @16:25:46.64 LyS1.seek 450ul @16:26:46.57 delay 10 seconds @16:26:56.59 AirS.reconfigure SlowAirS @16:26:56.70 AirS.reconfigure to mix into 1.37806 parts LyS1 @16:26:57.06 AirS.seek evac @16:26:57.09 LyS1.seek 300ul @16:27:12.19 AirS.reconfigure AirSconfig @16:27:12.26 AirS.seek :full @16:27:26.46 LyS1.seek :empty @16:27:56.51 PuckHeater.seek 84.5C @16:29:02.08 PuckHeater.hold 15:00,84.5C @16:44:00.22 LyS1.reconfigure LyS1config @16:44:00.28 LyS1.seek 900ul @16:44:08.61 AirS.seek :tVent @16:44:08.69 delay 2 seconds @16:44:10.71 AirS.reconfigure HalfSpeedAirS @16:44:10.77 AirS.seek :evac @16:44:38.53 delay 15 seconds @16:44:53.56 AirS.reconfigure AirSconfig @16:44:53.62 AirS.seek :tVent @16:45:07.83 delay 2 seconds @16:45:09.85 AirS.reconfigure HalfSpeedAirS @16:45:09.92 AirS.seek :evac @16:45:37.64 delay 15 seconds @16:45:52.66 AirS.reconfigure AirSconfig @16:45:52.72 AirS.seek :tVent @16:46:06.92 delay 2 seconds @16:46:08.95 AirS.reconfigure HalfSpeedAirS @16:46:09.01 AirS.seek :evac @16:46:36.73 delay 15 seconds @16:46:51.75 delay 1:00 @16:47:51.77 Handoff.select :waste @16:47:51.87 delay 15 seconds @16:48:06.89 AirS.seek :fVent @16:48:09.09 delay 10 seconds @16:48:19.11 AirS.reconfigure AirSconfig @16:48:19.17 AirS.seek :evac @16:48:20.61 Lysis Recovered in LyS1 Lysis Complete @16:48:20.63 Handoff.select :waste @16:48:20.66 LyS2.seek :full @16:48:20.74 LyS1.reconfigure DAmixLyS1 @16:48:20.80 LyS2.reconfigure DAmixLyS2 @16:48:21.19 LyS2.seek 1480ul @16:48:21.23 LyS1.seek 650ul @16:49:08.53 delay 5 seconds @16:49:13.55 Handoff.select :SPR @16:49:13.66 SPR.command "start 2 14" @16:49:14.91 Running Experiment 2 @16:49:14.92 delay 10 seconds @16:49:24.94 SPR.command "start 2 0" @16:49:28.27 Waiting up to 11:00 for SPR to enter state 1 @16:56:46.57 SPR.command "hold_on" @16:56:48.26 LyS2.seek 1130ul @16:56:48.30 LyS1.seek 300ul @16:57:54.43 delay 15 seconds @16:58:09.45 SPR.command "hold_off" @16:58:12.27 Waiting up to 25:00 for SPR to enter state 7 @17:09:48.76 Handoff.select :waste @17:09:48.88 LyS1.reconfigure LyS1config @17:09:48.94 LyS2.reconfigure LyS2config @17:09:49.00 Rep #1 SPR Analysis has Completed @17:09:49.69 Ended log /var/log/esp/spr18sep0416h.spr @17:09:49.71 SPR.command "stats_off" @17:09:51.70 -> Cmd.stop @17:09:51.80 Handoff.select :close @17:09:51.98 Gate.power :heat,:OFF @17:09:51.99 Gate.power :cartridge,:OFF @17:09:52.02 PV.seek :locked @17:09:52.91 PinPort.seek :clear @17:09:58.92 ArS.seek :clear @17:09:59.04 LyS1.seek :clear @17:09:59.17 LyS2.seek :clear @17:09:59.30 AirS.seek :clear @17:10:16.66 ArS.coast @17:10:16.71 LyS1.coast @17:10:16.76 LyS2.coast @17:10:16.81 AirS.coast @17:10:16.86 TV.coast @17:10:16.91 SP.coast @17:10:16.96 SC.coast @17:10:17.01 PV.coast @17:10:17.06 PinPort.coast @17:10:17.25 Gate.power :motor,:OFF @17:10:17.26 Gate.power :main,:OFF @17:10:17.29 Gate.power :core,:OFF @17:10:17.31 Gate.power :analytic1,:OFF @17:10:17.33 Gate.power :analytic2,:OFF @17:10:17.35 Gate.power :analytic3,:OFF @17:10:17.37 Safely stopped and ready to power off