@01:49:42.65EDT29-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @01:49:42.67 >BREAK< ESP3 Gateway v0.99 for cartridge bus @01:49:43.97 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @01:49:45.27 Polling Can every 5:00 @01:49:45.57 Clients may connect on TCP port 9999 @01:49:45.58 Connecting to 10.89.5.2:9999 @01:49:45.61 Waiting for espclients... @01:49:46.02 Session Begun @01:49:47.96 -> showStatus @01:49:49.97 -> Cmd.loadCartridge @01:49:50.10 Gate.power :main,:ON,limit to 5000mA @01:49:50.12 Gate.power :analytic1,:ON,limit to 5000mA @01:49:50.14 Gate.power :analytic2,:ON,limit to 5000mA @01:49:50.16 Gate.power :analytic3,:ON,limit to 5000mA @01:49:50.30 Powering core bus @01:49:52.61 SPR Module 1, FW Rev. B, FPGA Rev. C @01:49:52.71 ArS.configure ArSconfig @01:49:52.81 LyS1.configure LyS1config @01:49:52.93 LyS2.configure LyS2config @01:49:53.04 AirS.configure AirSconfig @01:49:53.16 TV.configure TVconfig @01:49:53.28 SP.configure SPconfig @01:49:53.39 SC.configure SCconfig @01:49:53.52 PV.configure PVconfig @01:49:53.64 PinPort.configure PPconfig @01:49:53.76 Sea.configure SPconfig @01:49:53.81 All elf controllers running firmware version 4.5 @01:49:53.83 Gate.power :motor,:ON,limit to 5000mA @01:49:54.18 ArS.reconfigure ArSconfig @01:49:54.24 LyS1.reconfigure LyS1config @01:49:54.31 LyS2.reconfigure LyS2config @01:49:54.37 AirS.reconfigure AirSconfig @01:49:54.49 TV.reconfigure TVconfig @01:49:54.58 PV.reconfigure PVconfig @01:49:54.61 ArS.home.jog 0 @01:49:54.66 LyS1.home.jog 0 @01:49:54.69 LyS2.home.jog 0 @01:49:54.74 PinPort.reconfigure PPconfig @01:49:54.76 AirS.home.jog 0 @01:49:54.88 TV.home.jog 0 @01:49:55.03 PV.home.jog 0 @01:49:55.14 PinPort.home.jog 0 @01:49:55.74 LyS2.reconfigure HomeSyringe @01:49:55.76 LyS1.reconfigure HomeSyringe @01:49:55.81 PinPort.reconfigure HomePP @01:49:55.83 TV.reconfigure HomeTV @01:49:55.87 AirS.reconfigure HomeMagSyringe @01:49:55.92 PV.reconfigure HomePV @01:49:55.98 ArS.reconfigure HomeMagSyringe @01:49:56.15 LyS2.jog -258 @01:49:56.17 PinPort.jog -111 @01:49:56.21 TV.jog -537 @01:49:56.25 LyS1.jog -266 @01:49:56.29 PV.jog -1480 @01:49:56.32 AirS.jog -319 @01:49:56.43 ArS.jog -228 @01:49:56.70 PinPort.setRawPosition! 0 @01:49:56.75 PinPort.seek :home @01:49:57.10 PinPort.reconfigure PPconfig @01:49:57.20 AirS.setRawPosition! -50 @01:49:57.21 LyS2.setRawPosition! -50 @01:49:57.23 LyS1.setRawPosition! -50 @01:49:57.26 ArS.setRawPosition! -50 @01:49:57.36 AirS.seek :home @01:49:57.42 LyS2.seek :home @01:49:57.45 LyS1.seek :home @01:49:57.58 ArS.seek :home @01:49:57.73 PV.setRawPosition! -50 @01:49:57.78 PV.seek :home @01:49:57.92 AirS.reconfigure AirSconfig @01:49:57.94 LyS2.reconfigure LyS2config @01:49:58.09 LyS1.reconfigure LyS1config @01:49:58.12 ArS.reconfigure ArSconfig @01:49:58.16 PV.reconfigure PVconfig @01:49:58.33 TV.setRawPosition! 0 @01:49:58.38 TV.seek :home @01:49:58.48 TV.reconfigure TVconfig @01:49:58.77 TV.seek :clear @01:50:00.38 TV.coast @01:50:00.44 SC.reconfigure HomeSC @01:50:00.50 SC.home.jog 0 @01:50:01.25 SC.reconfigure SCconfig @01:50:01.31 SC.seek 33 @01:50:01.41 Selecting Cartridge 32 @01:50:01.71 SC.seek 32 @01:50:02.22 LyS2.seek :locked @01:50:02.35 PV.seek :locked @01:50:02.48 AirS.seek :locked @01:50:06.56 Powering cartridge bus @01:50:08.69 Gate.setIR 1750,5000,0,6 @01:50:08.82 Gate.setIR 0,5000,0,6 @01:50:08.87 Loaded Lyse-n-Go Cartridge @01:50:08.88 PuckHeater.configure HeatConfig @01:50:08.94 Gate.power :heat,:ON,limit to 5000mA @01:50:28.73 -> Cmd.startFiltering @01:50:28.96 Duration of filtering limited to 1:05:00 @01:50:29.21 Priming sample loop w/100ml, bypass w/10ml @01:50:29.29 SP.setPosition! 0ml @01:50:29.32 Intake.open @01:50:29.35 Exhaust.open @01:50:30.21 Sea @-42.9psia @01:50:30.22 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @01:50:36.00 Vacuum tare is 25% of full scale @01:50:36.02 PB.open @01:50:36.06 Exhaust.close @01:50:36.85 Sea @-42.9psia @01:50:36.94 SP.reconfigure SPprime @01:50:37.01 SP.seek 10ml,1:21 @01:50:47.86 SP.setPosition! 0ml @01:50:47.90 PB.close @01:50:47.93 Exhaust.open @01:50:48.79 Sea @-42.9psia @01:50:48.87 SP.reconfigure SPprime @01:50:48.94 SP.seek 100ml,8:51 @01:52:40.38 Intake.close @01:52:41.13 Pressurizing cartridge to 26psi (try #1 of 3) @01:52:41.14 SP.setPosition! 0ml @01:52:41.18 PB.open @01:52:41.98 TV.seek :crack @01:52:42.77 TV.seek :clear @01:52:43.56 Intake.open @01:52:44.99 PB.close @01:52:45.72 Exhaust.close @01:52:46.47 Sea @-42.9psia @01:52:46.55 SP.reconfigure SPcharge @01:52:46.61 SP.seek 2.3ml,42 seconds @01:52:56.50 Cartridge pressurized with 0.456ml to 26.1psi @01:52:56.87 delay 3 seconds @01:52:59.94 Cartridge at 21.6psi 3 seconds later @01:53:00.02 TV.seek :cartridge @01:53:01.84 TV.seek :clear @01:53:03.66 Sampling 1000.0ml @01:53:03.67 SP.setPosition! 0ml @01:53:03.72 Exhaust.open @01:53:04.49 Sea @-42.9psia @01:53:04.58 SP.reconfigure SPsample @01:53:04.64 SP.seek 1000ml,1:23:53 @01:53:05.60 Cartridge 32 sampling 0/1000ml at 0.17ml/s with 3.1psi vacuum @01:54:05.61 Cartridge 32 sampling 33/1000ml at 0.57ml/s with 24.2psi vacuum @01:55:05.60 Cartridge 32 sampling 65/1000ml at 0.53ml/s with 20.6psi vacuum @01:56:05.61 Cartridge 32 sampling 98/1000ml at 0.55ml/s with 22.8psi vacuum @01:57:05.61 Cartridge 32 sampling 130/1000ml at 0.54ml/s with 24.4psi vacuum @01:58:05.61 Cartridge 32 sampling 162/1000ml at 0.51ml/s with 21.0psi vacuum @01:59:05.61 Cartridge 32 sampling 194/1000ml at 0.52ml/s with 20.4psi vacuum @02:00:05.60 Cartridge 32 sampling 225/1000ml at 0.51ml/s with 20.8psi vacuum @02:01:05.61 Cartridge 32 sampling 256/1000ml at 0.54ml/s with 24.0psi vacuum @02:02:05.61 Cartridge 32 sampling 287/1000ml at 0.48ml/s with 23.9psi vacuum @02:03:05.61 Cartridge 32 sampling 317/1000ml at 0.49ml/s with 21.8psi vacuum @02:04:05.61 Cartridge 32 sampling 346/1000ml at 0.47ml/s with 19.9psi vacuum @02:05:05.61 Cartridge 32 sampling 374/1000ml at 0.47ml/s with 24.1psi vacuum @02:06:05.61 Cartridge 32 sampling 401/1000ml at 0.46ml/s with 21.2psi vacuum @02:07:05.87 Cartridge 32 sampling 428/1000ml at 0.40ml/s with 24.5psi vacuum @02:08:05.61 Cartridge 32 sampling 453/1000ml at 0.41ml/s with 20.0psi vacuum @02:09:05.61 Cartridge 32 sampling 477/1000ml at 0.36ml/s with 20.7psi vacuum @02:10:05.61 Cartridge 32 sampling 500/1000ml at 0.34ml/s with 22.9psi vacuum @02:11:05.61 Cartridge 32 sampling 521/1000ml at 0.31ml/s with 25.1psi vacuum @02:12:05.61 Cartridge 32 sampling 541/1000ml at 0.32ml/s with 26.0psi vacuum @02:13:05.61 Cartridge 32 sampling 559/1000ml at 0.28ml/s with 23.9psi vacuum @02:14:05.61 Cartridge 32 sampling 576/1000ml at 0.24ml/s with 22.8psi vacuum @02:15:05.61 Cartridge 32 sampling 592/1000ml at 0.28ml/s with 24.0psi vacuum @02:16:05.61 Cartridge 32 sampling 607/1000ml at 0.22ml/s with 21.8psi vacuum @02:17:05.61 Cartridge 32 sampling 621/1000ml at 0.21ml/s with 23.3psi vacuum @02:18:05.61 Cartridge 32 sampling 634/1000ml at 0.20ml/s with 20.8psi vacuum @02:19:05.61 Cartridge 32 sampling 647/1000ml at 0.21ml/s with 21.4psi vacuum @02:20:05.61 Cartridge 32 sampling 659/1000ml at 0.22ml/s with 22.0psi vacuum @02:21:05.61 Cartridge 32 sampling 672/1000ml at 0.20ml/s with 25.9psi vacuum @02:22:05.61 Cartridge 32 sampling 684/1000ml at 0.20ml/s with 28.2psi vacuum @02:23:05.61 Cartridge 32 sampling 696/1000ml at 0.20ml/s with 29.3psi vacuum @02:23:31.31 Flow averaged 0.39ml/s over 30:22 @02:23:31.33 Waiting up to 16 seconds for vacuum to reduce from 29.1 to 18.0psi @02:23:31.95 Relieved excess vacuum in 6.2 seconds @02:23:31.98 SP.seek 1000ml,25:26 @02:24:01.24 Flow averaged 0.25ml/s over 24 seconds @02:24:01.27 Waiting up to 16 seconds for vacuum to reduce from 29.3 to 18.0psi @02:24:01.89 Relieved excess vacuum in 6.8 seconds @02:24:01.92 SP.seek 1000ml,24:57 @02:24:05.60 Cartridge 32 sampling 708/1000ml at 0.20ml/s with 31.4psi vacuum @02:24:18.26 Flow averaged 0.23ml/s over 14 seconds @02:24:18.28 Waiting up to 12 seconds for vacuum to reduce from 27.5 to 18.0psi @02:24:18.90 Relieved excess vacuum in 3.2 seconds @02:24:18.93 SP.seek 1000ml,24:41 @02:24:32.07 Flow averaged 0.20ml/s over 14 seconds @02:24:32.09 Intake.close @02:24:32.14 Exhaust.close @02:24:32.92 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @02:24:33.01 Sampled 712.6ml @02:24:33.09 TV.seek :bypass @02:24:34.71 TV.seek :clear @02:24:36.81 -> Cmd.startProcessing @02:24:38.62 SPR.command "read_sequences" @02:24:39.02 SPR.command "stats_on" @02:24:39.06 SPR.command "start 0 1" @02:24:41.07 Begun log /var/log/esp/spr18aug2902h.spr @02:24:41.86 Handoff.select :waste @02:24:41.97 ArS.seek empty @02:24:59.68 PinPort.seek :cartridge @02:25:05.39 LyS1.seek 1350ul @02:25:11.33 PV.seek :reagent @02:25:12.41 AirS.seek :tVent @02:25:14.49 delay 2 seconds @02:25:16.52 AirS.reconfigure EvacAirS @02:25:16.58 AirS.seek :evac @02:25:38.86 delay 15 seconds @02:25:53.89 AirS.reconfigure AirSconfig @02:25:53.95 AirS.seek :tVent @02:26:08.15 delay 2 seconds @02:26:10.18 AirS.reconfigure EvacAirS @02:26:10.23 AirS.seek :evac @02:26:32.52 delay 15 seconds @02:26:47.55 AirS.reconfigure AirSconfig @02:26:47.61 AirS.seek :tVent @02:27:01.81 delay 2 seconds @02:27:03.84 AirS.reconfigure EvacAirS @02:27:03.90 AirS.seek :evac @02:27:26.18 delay 15 seconds @02:27:41.21 AirS.reconfigure AirSconfig @02:27:41.27 AirS.seek :tVent @02:27:55.47 delay 2 seconds @02:27:57.50 AirS.reconfigure EvacAirS @02:27:57.55 AirS.seek :evac @02:28:19.85 delay 15 seconds @02:28:34.88 AirS.reconfigure AirSconfig @02:28:34.94 AirS.seek :tVent @02:28:49.14 delay 2 seconds @02:28:51.17 AirS.reconfigure EvacAirS @02:28:51.22 AirS.seek :evac @02:29:13.51 delay 15 seconds @02:29:28.54 delay 1:30 @02:30:58.56 AirS.reconfigure AirSconfig @02:30:58.67 AirS.seek :fVent @02:31:00.10 delay 15 seconds @02:31:15.13 LyS1.reconfigure SlowLyS1 @02:31:15.24 LyS1.seek 1050ul @02:31:45.25 delay 5 seconds @02:31:50.28 Handoff.select :blocked @02:31:50.44 LyS1.seek 450ul @02:32:50.39 delay 10 seconds @02:33:00.42 AirS.reconfigure SlowAirS @02:33:00.53 AirS.reconfigure to mix into 1.37806 parts LyS1 @02:33:00.89 AirS.seek evac @02:33:00.93 LyS1.seek 300ul @02:33:16.03 AirS.reconfigure AirSconfig @02:33:16.10 AirS.seek :full @02:33:30.30 LyS1.seek :empty @02:34:00.39 PuckHeater.seek 84.1C @02:35:02.80 PuckHeater.hold 15:00,84.1C @02:50:01.82 LyS1.reconfigure LyS1config @02:50:01.88 LyS1.seek 900ul @02:50:10.21 AirS.seek :tVent @02:50:10.29 delay 2 seconds @02:50:12.31 AirS.reconfigure HalfSpeedAirS @02:50:12.37 AirS.seek :evac @02:50:40.16 delay 15 seconds @02:50:55.19 AirS.reconfigure AirSconfig @02:50:55.26 AirS.seek :tVent @02:51:09.47 delay 2 seconds @02:51:11.49 AirS.reconfigure HalfSpeedAirS @02:51:11.55 AirS.seek :evac @02:51:39.27 delay 15 seconds @02:51:54.30 AirS.reconfigure AirSconfig @02:51:54.36 AirS.seek :tVent @02:52:08.58 delay 2 seconds @02:52:10.60 AirS.reconfigure HalfSpeedAirS @02:52:10.66 AirS.seek :evac @02:52:38.39 delay 15 seconds @02:52:53.42 delay 1:00 @02:53:53.44 Handoff.select :waste @02:53:53.54 delay 15 seconds @02:54:08.56 AirS.seek :fVent @02:54:10.75 delay 10 seconds @02:54:20.78 AirS.reconfigure AirSconfig @02:54:20.83 AirS.seek :evac @02:54:22.27 Lysis Recovered in LyS1 @02:54:22.28 Lysis Complete @02:54:22.30 Handoff.select :waste @02:54:22.33 LyS2.seek :full @02:54:22.43 LyS1.reconfigure DAmixLyS1 @02:54:22.49 LyS2.reconfigure DAmixLyS2 @02:54:22.88 LyS2.seek 1480ul @02:54:22.92 LyS1.seek 650ul @02:55:10.24 delay 5 seconds @02:55:15.27 Handoff.select :SPR @02:55:15.38 SPR.command "start 2 14" @02:55:16.77 Running Experiment 2 @02:55:16.78 delay 10 seconds @02:55:26.80 SPR.command "start 2 0" @02:55:30.63 Waiting up to 11:00 for SPR to enter state 1 @03:02:49.38 SPR.command "hold_on" @03:02:51.07 LyS2.seek 1130ul @03:02:51.11 LyS1.seek 300ul @03:03:57.27 delay 15 seconds @03:04:12.29 SPR.command "hold_off" @03:04:15.08 Waiting up to 25:00 for SPR to enter state 7 @03:15:51.57 Handoff.select :waste @03:15:51.69 LyS1.reconfigure LyS1config @03:15:51.75 LyS2.reconfigure LyS2config @03:15:51.81 Rep #1 SPR Analysis has Completed @03:15:52.49 Ended log /var/log/esp/spr18aug2902h.spr @03:15:52.52 SPR.command "stats_off" @03:15:54.55 -> Cmd.stop @03:15:54.64 Handoff.select :close @03:15:54.82 Gate.power :heat,:OFF @03:15:54.83 Gate.power :cartridge,:OFF @03:15:54.87 PV.seek :locked @03:15:55.75 PinPort.seek :clear @03:16:01.76 ArS.seek :clear @03:16:01.89 LyS1.seek :clear @03:16:02.03 LyS2.seek :clear @03:16:02.16 AirS.seek :clear @03:16:19.52 ArS.coast @03:16:19.57 LyS1.coast @03:16:19.62 LyS2.coast @03:16:19.67 AirS.coast @03:16:19.72 TV.coast @03:16:19.77 SP.coast @03:16:19.82 SC.coast @03:16:19.87 PV.coast @03:16:19.92 PinPort.coast @03:16:20.11 Gate.power :motor,:OFF @03:16:20.12 Gate.power :main,:OFF @03:16:20.15 Gate.power :core,:OFF @03:16:20.17 Gate.power :analytic1,:OFF @03:16:20.19 Gate.power :analytic2,:OFF @03:16:20.21 Gate.power :analytic3,:OFF @03:16:20.22 Safely stopped and ready to power off