@16:19:18.18EDT26-Aug-18
>BREAK< ESP3 Gateway v0.99 for core bus @16:19:18.19 >BREAK< ESP3 Gateway v0.99 for cartridge bus @16:19:19.44 Configuration for honu by brent@mbari.org /home/esp/esp2/type/auv/honu/configure.rb @16:19:20.65 Polling Can every 5:00 @16:19:20.95 Clients may connect on TCP port 9999 @16:19:20.96 Connecting to 10.89.5.2:9999 @16:19:21.00 Waiting for espclients... @16:19:21.24 Session Begun @16:19:23.22 -> showStatus @16:19:25.22 -> Cmd.loadCartridge @16:19:25.34 Gate.power :main,:ON,limit to 5000mA @16:19:25.35 Gate.power :analytic1,:ON,limit to 5000mA @16:19:25.38 Gate.power :analytic2,:ON,limit to 5000mA @16:19:25.40 Gate.power :analytic3,:ON,limit to 5000mA @16:19:25.54 Powering core bus @16:19:27.84 SPR Module 1, FW Rev. B, FPGA Rev. C @16:19:27.93 ArS.configure ArSconfig @16:19:28.03 LyS1.configure LyS1config @16:19:28.15 LyS2.configure LyS2config @16:19:28.25 AirS.configure AirSconfig @16:19:28.37 TV.configure TVconfig @16:19:28.49 SP.configure SPconfig @16:19:28.61 SC.configure SCconfig @16:19:28.73 PV.configure PVconfig @16:19:28.85 PinPort.configure PPconfig @16:19:28.97 Sea.configure SPconfig @16:19:29.03 All elf controllers running firmware version 4.5 @16:19:29.04 Gate.power :motor,:ON,limit to 5000mA @16:19:29.16 ArS.reconfigure ArSconfig @16:19:29.43 ArS.home.jog 0 @16:19:29.60 PV.reconfigure PVconfig @16:19:29.67 TV.reconfigure TVconfig @16:19:29.71 LyS2.reconfigure LyS2config @16:19:29.80 AirS.reconfigure AirSconfig @16:19:29.83 LyS1.reconfigure LyS1config @16:19:29.86 PinPort.reconfigure PPconfig @16:19:30.03 TV.home.jog 0 @16:19:30.09 LyS2.home.jog 0 @16:19:30.11 PV.home.jog 0 @16:19:30.14 LyS1.home.jog 0 @16:19:30.17 AirS.home.jog 0 @16:19:30.19 PinPort.home.jog 0 @16:19:30.57 ArS.reconfigure HomeMagSyringe @16:19:30.93 TV.reconfigure HomeTV @16:19:30.95 LyS2.reconfigure HomeSyringe @16:19:30.98 ArS.jog -261 @16:19:31.03 PinPort.reconfigure HomePP @16:19:31.05 PV.reconfigure HomePV @16:19:31.08 AirS.reconfigure HomeMagSyringe @16:19:31.13 LyS1.reconfigure HomeSyringe @16:19:31.34 TV.jog -554 @16:19:31.38 LyS2.jog -265 @16:19:31.41 PV.jog -1477 @16:19:31.44 PinPort.jog -110 @16:19:31.47 AirS.jog -318 @16:19:31.49 LyS1.jog -266 @16:19:31.75 ArS.setRawPosition! -50 @16:19:31.79 ArS.seek :home @16:19:31.95 PinPort.setRawPosition! 0 @16:19:32.00 PinPort.seek :home @16:19:32.33 PinPort.reconfigure PPconfig @16:19:32.39 LyS2.setRawPosition! -50 @16:19:32.41 ArS.reconfigure ArSconfig @16:19:32.50 LyS2.seek :home @16:19:32.65 AirS.setRawPosition! -50 @16:19:32.66 LyS1.setRawPosition! -50 @16:19:32.75 AirS.seek :home @16:19:32.79 LyS1.seek :home @16:19:32.96 PV.setRawPosition! -50 @16:19:32.98 LyS2.reconfigure LyS2config @16:19:33.05 PV.seek :home @16:19:33.20 AirS.reconfigure AirSconfig @16:19:33.22 LyS1.reconfigure LyS1config @16:19:33.38 PV.reconfigure PVconfig @16:19:33.47 TV.setRawPosition! 0 @16:19:33.52 TV.seek :home @16:19:33.61 TV.reconfigure TVconfig @16:19:33.79 TV.seek :clear @16:19:35.40 TV.coast @16:19:35.46 SC.reconfigure HomeSC @16:19:35.52 SC.home.jog 0 @16:19:36.29 SC.reconfigure SCconfig @16:19:36.35 SC.seek 44 @16:19:36.43 Selecting Cartridge 43 @16:19:36.74 SC.seek 43 @16:19:37.24 LyS2.seek :locked @16:19:37.37 PV.seek :locked @16:19:37.50 AirS.seek :locked @16:19:41.58 Powering cartridge bus @16:19:43.71 Gate.setIR 1750,5000,0,6 @16:19:43.83 Gate.setIR 0,5000,0,6 @16:19:43.88 Loaded Lyse-n-Go Cartridge @16:19:43.89 PuckHeater.configure HeatConfig @16:19:43.95 Gate.power :heat,:ON,limit to 5000mA @16:20:03.94 -> Cmd.startFiltering @16:20:04.16 Duration of filtering limited to 1:05:00 @16:20:04.41 Priming sample loop w/100ml, bypass w/10ml @16:20:04.49 SP.setPosition! 0ml @16:20:04.53 Intake.open @16:20:04.57 Exhaust.open @16:20:05.37 Sea @-42.9psia @16:20:05.39 Waiting 4 - 300s for filter pressure to stabilize +/-0.5psi @16:20:10.92 Vacuum tare is 24% of full scale @16:20:11.18 PB.open @16:20:11.22 Exhaust.close @16:20:12.04 Sea @-42.9psia @16:20:12.12 SP.reconfigure SPprime @16:20:12.19 SP.seek 10ml,1:21 @16:20:23.05 SP.setPosition! 0ml @16:20:23.09 PB.close @16:20:23.12 Exhaust.open @16:20:23.94 Sea @-42.9psia @16:20:24.02 SP.reconfigure SPprime @16:20:24.08 SP.seek 100ml,8:51 @16:22:18.50 Intake.close @16:22:19.26 Pressurizing cartridge to 26psi (try #1 of 3) @16:22:19.27 SP.setPosition! 0ml @16:22:19.32 PB.open @16:22:20.09 TV.seek :crack @16:22:20.88 TV.seek :clear @16:22:21.68 Intake.open @16:22:23.15 PB.close @16:22:23.83 Exhaust.close @16:22:24.56 Sea @-42.9psia @16:22:24.64 SP.reconfigure SPcharge @16:22:24.71 SP.seek 2.3ml,42 seconds @16:22:33.79 Cartridge pressurized with 0.385ml to 27.0psi @16:22:34.17 delay 3 seconds @16:22:37.23 Cartridge at 23.2psi 3 seconds later @16:22:37.32 TV.seek :cartridge @16:22:39.14 TV.seek :clear @16:22:40.96 Sampling 1000.0ml @16:22:40.97 SP.setPosition! 0ml @16:22:41.03 Exhaust.open @16:22:41.77 Sea @-42.9psia @16:22:41.86 SP.reconfigure SPsample @16:22:41.93 SP.seek 1000ml,1:23:53 @16:22:42.88 Cartridge 43 sampling 0/1000ml at 0.17ml/s with 5.6psi vacuum @16:23:42.89 Cartridge 43 sampling 32/1000ml at 0.55ml/s with 25.2psi vacuum @16:24:42.89 Cartridge 43 sampling 64/1000ml at 0.53ml/s with 26.8psi vacuum @16:25:42.89 Cartridge 43 sampling 96/1000ml at 0.51ml/s with 27.4psi vacuum @16:26:42.89 Cartridge 43 sampling 128/1000ml at 0.54ml/s with 24.2psi vacuum @16:27:42.89 Cartridge 43 sampling 159/1000ml at 0.50ml/s with 24.4psi vacuum @16:28:42.89 Cartridge 43 sampling 190/1000ml at 0.50ml/s with 26.9psi vacuum @16:29:42.89 Cartridge 43 sampling 220/1000ml at 0.52ml/s with 23.9psi vacuum @16:30:42.89 Cartridge 43 sampling 249/1000ml at 0.47ml/s with 17.3psi vacuum @16:31:42.89 Cartridge 43 sampling 278/1000ml at 0.49ml/s with 24.5psi vacuum @16:32:42.89 Cartridge 43 sampling 306/1000ml at 0.46ml/s with 23.2psi vacuum @16:33:42.89 Cartridge 43 sampling 334/1000ml at 0.47ml/s with 20.6psi vacuum @16:34:42.89 Cartridge 43 sampling 360/1000ml at 0.45ml/s with 22.1psi vacuum @16:35:42.89 Cartridge 43 sampling 386/1000ml at 0.43ml/s with 20.9psi vacuum @16:36:42.89 Cartridge 43 sampling 410/1000ml at 0.38ml/s with 17.8psi vacuum @16:37:42.89 Cartridge 43 sampling 434/1000ml at 0.38ml/s with 19.2psi vacuum @16:38:43.14 Cartridge 43 sampling 456/1000ml at 0.34ml/s with 17.7psi vacuum @16:39:42.89 Cartridge 43 sampling 476/1000ml at 0.36ml/s with 22.8psi vacuum @16:40:42.89 Cartridge 43 sampling 494/1000ml at 0.27ml/s with 21.3psi vacuum @16:41:42.89 Cartridge 43 sampling 512/1000ml at 0.30ml/s with 24.8psi vacuum @16:42:42.89 Cartridge 43 sampling 528/1000ml at 0.29ml/s with 20.2psi vacuum @16:43:42.89 Cartridge 43 sampling 543/1000ml at 0.24ml/s with 23.7psi vacuum @16:44:42.89 Cartridge 43 sampling 557/1000ml at 0.26ml/s with 20.7psi vacuum @16:45:42.89 Cartridge 43 sampling 571/1000ml at 0.20ml/s with 26.3psi vacuum @16:46:42.89 Cartridge 43 sampling 583/1000ml at 0.20ml/s with 24.8psi vacuum @16:47:42.89 Cartridge 43 sampling 596/1000ml at 0.20ml/s with 27.6psi vacuum @16:48:42.89 Cartridge 43 sampling 608/1000ml at 0.20ml/s with 24.6psi vacuum @16:49:42.89 Cartridge 43 sampling 620/1000ml at 0.20ml/s with 29.1psi vacuum @16:50:41.50 Flow averaged 0.38ml/s over 27:52 @16:50:41.53 Waiting up to 11 seconds for vacuum to reduce from 27.1 to 18.0psi @16:50:42.15 Relieved excess vacuum in 9.1 seconds @16:50:42.17 SP.seek 1000ml,31:10 @16:50:42.88 Cartridge 43 sampling 632/1000ml at 0.12ml/s with 10.8psi vacuum @16:51:19.15 Flow averaged 0.22ml/s over 34 seconds @16:51:19.17 Waiting up to 13 seconds for vacuum to reduce from 27.9 to 18.0psi @16:51:19.78 Relieved excess vacuum in 4.5 seconds @16:51:19.81 SP.seek 1000ml,30:33 @16:51:36.17 Flow averaged 0.24ml/s over 14 seconds @16:51:36.19 Waiting up to 8 seconds for vacuum to reduce from 26.1 to 18.0psi @16:51:36.81 Relieved excess vacuum in 3.9 seconds @16:51:36.84 SP.seek 1000ml,30:17 @16:51:42.89 Cartridge 43 sampling 644/1000ml at 0.20ml/s with 26.3psi vacuum @16:51:53.17 Flow averaged 0.20ml/s over 17 seconds @16:51:53.18 Intake.close @16:51:53.24 Exhaust.close @16:51:54.00 Cartridge::Sampler::Clogged in FILTERING -- Cartridge clogged @16:51:54.10 Sampled 646.1ml @16:51:54.18 TV.seek :bypass @16:51:55.79 TV.seek :clear @16:51:57.91 -> Cmd.startProcessing @16:51:59.70 SPR.command "read_sequences" @16:51:59.95 SPR.command "stats_on" @16:51:59.98 SPR.command "start 0 1" @16:52:01.99 Begun log /var/log/esp/spr18aug2616h.spr @16:52:02.80 Handoff.select :waste @16:52:02.92 ArS.seek empty @16:52:20.62 PinPort.seek :cartridge @16:52:26.33 LyS1.seek 1350ul @16:52:32.27 PV.seek :reagent @16:52:33.11 AirS.seek :tVent @16:52:35.17 delay 2 seconds @16:52:37.19 AirS.reconfigure EvacAirS @16:52:37.25 AirS.seek :evac @16:52:59.80 delay 15 seconds @16:53:14.82 AirS.reconfigure AirSconfig @16:53:14.88 AirS.seek :tVent @16:53:29.09 delay 2 seconds @16:53:31.11 AirS.reconfigure EvacAirS @16:53:31.18 AirS.seek :evac @16:53:53.47 delay 15 seconds @16:54:08.49 AirS.reconfigure AirSconfig @16:54:08.55 AirS.seek :tVent @16:54:22.76 delay 2 seconds @16:54:24.78 AirS.reconfigure EvacAirS @16:54:24.84 AirS.seek :evac @16:54:47.12 delay 15 seconds @16:55:02.14 AirS.reconfigure AirSconfig @16:55:02.20 AirS.seek :tVent @16:55:16.41 delay 2 seconds @16:55:18.43 AirS.reconfigure EvacAirS @16:55:18.49 AirS.seek :evac @16:55:40.79 delay 15 seconds @16:55:55.82 AirS.reconfigure AirSconfig @16:55:55.88 AirS.seek :tVent @16:56:10.10 delay 2 seconds @16:56:12.12 AirS.reconfigure EvacAirS @16:56:12.18 AirS.seek :evac @16:56:34.47 delay 15 seconds @16:56:49.49 delay 1:30 @16:58:19.51 AirS.reconfigure AirSconfig @16:58:19.57 AirS.seek :fVent @16:58:21.01 delay 15 seconds @16:58:36.03 LyS1.reconfigure SlowLyS1 @16:58:36.13 LyS1.seek 1050ul @16:59:06.19 delay 5 seconds @16:59:11.21 Handoff.select :blocked @16:59:11.41 LyS1.seek 450ul @17:00:11.35 delay 10 seconds @17:00:21.38 AirS.reconfigure SlowAirS @17:00:21.49 AirS.reconfigure to mix into 1.37806 parts LyS1 @17:00:21.85 AirS.seek evac @17:00:21.88 LyS1.seek 300ul @17:00:36.99 AirS.reconfigure AirSconfig @17:00:37.04 AirS.seek :full @17:00:51.26 LyS1.seek :empty @17:01:21.36 PuckHeater.seek 84.2C @17:02:22.57 PuckHeater.hold 15:00,84.2C @17:17:21.78 LyS1.reconfigure LyS1config @17:17:21.84 LyS1.seek 900ul @17:17:30.18 AirS.seek :tVent @17:17:30.26 delay 2 seconds @17:17:32.28 AirS.reconfigure HalfSpeedAirS @17:17:32.34 AirS.seek :evac @17:18:00.07 delay 15 seconds @17:18:15.29 AirS.reconfigure AirSconfig @17:18:15.40 AirS.seek :tVent @17:18:29.61 delay 2 seconds @17:18:31.63 AirS.reconfigure HalfSpeedAirS @17:18:31.69 AirS.seek :evac @17:18:59.42 delay 15 seconds @17:19:14.44 AirS.reconfigure AirSconfig @17:19:14.50 AirS.seek :tVent @17:19:28.71 delay 2 seconds @17:19:30.73 AirS.reconfigure HalfSpeedAirS @17:19:30.79 AirS.seek :evac @17:19:58.53 delay 15 seconds @17:20:13.55 delay 1:00 @17:21:13.57 Handoff.select :waste @17:21:13.67 delay 15 seconds @17:21:28.69 AirS.seek :fVent @17:21:30.89 delay 10 seconds @17:21:40.91 AirS.reconfigure AirSconfig @17:21:40.96 AirS.seek :evac @17:21:42.40 Lysis Recovered in LyS1 @17:21:42.42 Lysis Complete @17:21:42.43 Handoff.select :waste @17:21:42.46 LyS2.seek :full @17:21:42.54 LyS1.reconfigure DAmixLyS1 @17:21:42.60 LyS2.reconfigure DAmixLyS2 @17:21:42.98 LyS2.seek 1480ul @17:21:43.02 LyS1.seek 650ul @17:22:30.33 delay 5 seconds @17:22:35.35 Handoff.select :SPR @17:22:35.47 SPR.command "start 2 14" @17:22:36.76 Running Experiment 2 @17:22:36.77 delay 10 seconds @17:22:46.79 SPR.command "start 2 0" @17:22:50.12 Waiting up to 11:00 for SPR to enter state 1 @17:30:08.41 SPR.command "hold_on" @17:30:10.60 LyS2.seek 1130ul @17:30:10.63 LyS1.seek 300ul @17:31:16.80 delay 15 seconds @17:31:31.82 SPR.command "hold_off" @17:31:35.06 Waiting up to 25:00 for SPR to enter state 7 @17:43:10.61 Handoff.select :waste @17:43:10.73 LyS1.reconfigure LyS1config @17:43:10.79 LyS2.reconfigure LyS2config @17:43:10.85 Rep #1 SPR Analysis has Completed @17:43:11.55 Ended log /var/log/esp/spr18aug2616h.spr @17:43:11.56 SPR.command "stats_off" @17:43:13.66 -> Cmd.stop @17:43:13.74 Handoff.select :close @17:43:13.92 Gate.power :heat,:OFF @17:43:13.93 Gate.power :cartridge,:OFF @17:43:13.96 PV.seek :locked @17:43:14.85 PinPort.seek :clear @17:43:20.62 ArS.seek :clear @17:43:21.00 LyS1.seek :clear @17:43:21.13 LyS2.seek :clear @17:43:21.26 AirS.seek :clear @17:43:38.60 ArS.coast @17:43:38.65 LyS1.coast @17:43:38.70 LyS2.coast @17:43:38.75 AirS.coast @17:43:38.80 TV.coast @17:43:38.85 SP.coast @17:43:38.90 SC.coast @17:43:38.95 PV.coast @17:43:39.00 PinPort.coast @17:43:39.19 Gate.power :motor,:OFF @17:43:39.20 Gate.power :main,:OFF @17:43:39.23 Gate.power :core,:OFF @17:43:39.25 Gate.power :analytic1,:OFF @17:43:39.27 Gate.power :analytic2,:OFF @17:43:39.29 Gate.power :analytic3,:OFF @17:43:39.31 Safely stopped and ready to power off